Main authors: Else K. Bünemann, Giulia Bongiorno, Zhanguo Bai, Rachel E. Creamer, Gerlinde De Deyn, Ron de Goede, Luuk Fleskens, Violette Geissen, Thom W. Kuyper, Paul Mäder, Mirjam Pulleman, Wijnand Sukkel, Jan Willem van Groenigen and Lijbert Brussaard
Editor: Jane Brandt
Source document: Bünemann, E. K. et al. (2018) Soil quality - A critical review. Soil Biology and Biochemistry, Volume 120, May 2018, pp 105-125

 

References cited in articles in this section of iSQAPERiS

  • Aalders, I., Hough, R.L., Towers, W., 2011. Risk of erosion in peat soils - an investigation using Bayesian belief networks. Soil Use and Management 27, 538-549.
  • Abdelfattah, A., Malacrinò, A., Wisniewski, M., Cacciola, S.O., Schena, L., 2017. Metabarcoding: A powerful tool to investigate microbial communities and shape future plant protection strategies. Biological Control.
  • Abdollahi, L., Hansen, E.M., Rickson, R.J., Munkholm, L.J., 2015. Overall assessment of soil quality on humid sandy loams: Effects of location, rotation and tillage. Soil & Tillage Research 145, 29-36.
  • Acton, D.F., Gregorich, L.J., 1995. The Health of Our Soils: Toward sustainable agriculture in Canada. Centre for Land and Biological Resources Research, Research Branch, Agriculture and Agri-Food Canada, Ottawa, Ont. xiv + 138 pp.
  • Akhtar-Schuster, M., Stringer, L.C., Erlewein, A., Metternicht, G., Minelli, S., Safriel, U., Sommer, S., 2017. Unpacking the concept of land degradation neutrality and addressing its operation through the Rio Conventions. Journal of Environmental Management 195, 4-15.
  • Allan, E., Manning, P., Alt, F., Binkenstein, J., Blaser, S., Bluethgen, N., Boehm, S., Grassein, F., Hoelzel, N., Klaus, V.H., Kleinebecker, T., Morris, E.K., Oelmann, Y., Prati, D., Renner, S.C., Rillig, M.C., Schaefer, M., Schloter, M., Schmitt, B., Schoening, I., Schrumpf, M., Solly, E., Sorkau, E., Steckel, J., Steffen-Dewenter, I., Stempfhuber, B., Tschapka, M., Weiner, C.N., Weisser, W.W., Werner, M., Westphal, C., Wilcke, W., Fischer, M., 2015. Land use intensification alters ecosystem multifunctionality via loss of biodiversity and changes to functional composition. Ecology Letters 18, 834-843.
  • Allen, B.L., Mallarino, A.P., Klatt, J.G., Baker, J.L., Camara, M., 2006. Soil and Surface Runoff Phosphorus Relationships for Five Typical USA Midwest Soils. Journal of Environmental Quality 35, 599-610.
  • Almario, J., Muller, D., Defago, G., Moenne-Loccoz, Y., 2014. Rhizosphere ecology and phytoprotection in soils naturally suppressive to Thielaviopsis black root rot of tobacco. Environmental Microbiology 16, 1949-1960. Andrews, S.S., Carroll, C.R., 2001. Designing a soil quality assessment tool for sustainable agroecosystem management. Ecological Applications 11, 1573-1585.
  • Andrews, S.S., Carroll, C.R., 2001. Designing a soil quality assessment tool for sustainable agroecosystem management. Ecological Applications 11, 1573-1585.
  • Andrews, S.S., Karlen, D.L., Mitchell, J.P., 2002. A comparison of soil quality indexing methods for vegetable production systems in Northern California. Agriculture, Ecosystems & Environment 90, 25-45.
  • Andrews, S.S., Karlen, D.L., Cambardella, C.A., 2004. The soil management assessment framework: A quantitative soil quality evaluation method. Soil Science Society of America Journal 68, 1945-1962.
  • Antoni, V., Saby, N.P.A., Jolivet, C., Toutain, B., Thorette, J., Arrouays, D., 2007. The French Information System on Soils: a decision support system for soil inventory, monitoring and management. Environmental Informatics and Systems Research, 225-261.
  • Armenise, E., Redmile-Gordon, M.A., Stellacci, A.M., Ciccarese, A., Rubino, P., 2013. Developing a soil quality index to compare soil fitness for agricultural use under different managements in the Mediterranean environment. Soil & Tillage Research 130, 91-98.
  • Arrouays, D., Jolivet, C., Boulonne, L., Biodineau, G., Saby, N., Grolleau, E., 2002. Une initiative nouvelle en France: la mise en place d'un réseau multi-institutionel de mesure de la qualité des sols (RMQS). Comptes Rendues de l'Académie d' Agriculture de France 88, 93-103.
  • Arrouays, D., Jolivet, C., Boulonne, L., Ratié, C., Saby, N., Grolleau, E., 2003. Le réseau de mesures de la Qualité des Sols (RMQS) de France. Étude et Gestion des Sols 10, 241-250.
  • Arshad, M.A., Coen, G.M., 1992. Characterization of soil quality: Physical and chemical criteria. American Journal of Alternative Agriculture 7, 25-31.
  • Arshad, M.A., Martin, S., 2002. Identifying critical limits for soil quality indicators in agro-ecosystems. Agriculture Ecosystems & Environment 88, 153-160.
  • Askari, M.S., Holden, N.M., 2015. Quantitative soil quality indexing of temperate arable management systems. Soil and Tillage Research 150, 57-67. Ball, B.C., Batey, T., Munkholm, L.J., 2007. Field assessment of soil structural quality - a development of the Peerlkamp test. Soil Use and Management 23, 329-337.
  • Ball, B.C., Munkholm, L.J., Batey, T., 2013. Applications of visual soil evaluation. Soil & Tillage Research 127, 1-2.
  • Ball, B.C., Guimarães, R.M.L., Cloy, J.M., Hargreaves, P.R., Shepherd, T.G., McKenzie, B.M., 2017. Visual soil evaluation: A summary of some applications and potential developments for agriculture. Soil and Tillage Research 173, 114-124.
  • Barrera-Bassols, N., Zinck, J.A., 2003. Ethnopedology: a worldwide view on the soil knowledge of local people. Geoderma 111, 171-195.
  • Barrios, E., 2007. Soil biota, ecosystem services and land productivity. Ecological Economics 64, 269-285.
  • Barrios, E., Coutinho, H.L.C., Medeiros, C.A.B., 2012. InPaC-S: Participatory Knowledge Integration on Indicators of Soil Quality - Methodological Guide. World Agroforestry Centre (ICRAF), Embrapa, CIAT. Nairobi., 1-178.
  • Barrios, E., Delve, R.J., Bekunda, A., Mowo, J., Agunda, J., Ramisch, J., Trejo, M.T., Thomas, R.J., 2006. Indicators of soil quality: A South-South development of a methodological guide for linking local and technical knowledge. Geoderma 135, 248-259.
  • Bastida, F., Zsolnay, A., Hernandez, T., Garcia, C., 2008. Past, present and future of soil quality indices: A biological perspective. Geoderma 147, 159-171.
  • Baveye, P.C., Laba, M., 2015. Moving away from the geostatistical lamppost: Why, where, and how does the spatial heterogeneity of soils matter? Ecological Modelling 298, 24-38.
  • Baveye, P.C., Baveye, J., Gowdy, J., 2016. Soil “Ecosystem” Services and Natural Capital: Critical Appraisal of Research on Uncertain Ground. Frontiers in Environmental Science 4, 1-49.
  • Beare, M.H., Cameron, K.C., Williams, P.H., Doscher, C., New Zealand Plant Protect Soc, I.N.C., 1997. Soil quality monitoring for sustainable agriculture, 520-528 pp.
  • Bennett, L.T., Mele, P.M., Annett, S., Kasel, S., 2010. Examining links between soil management, soil health, and public benefits in agricultural landscapes: An Australian perspective. Agriculture Ecosystems & Environment 139, 1-12.
  • Biswas, S., Hazra, G.C., Purakayastha, T.J., Saha, N., Mitran, T., Singha Roy, S., Basak, N., Mandal, B., 2017. Establishment of critical limits of indicators and indices of soil quality in rice-rice cropping systems under different soil orders. Geoderma 292, 34-48.
  • Black, H.I.J., Parekh, N.R., Chaplow, J.S., Monson, F., Watkins, J., Creamer, R., Potter, E.D., Poskitt, J.M., Rowland, P., Ainsworth, G., Hornung, M., 2003. Assessing soil biodiversity across Great Britain: national trends in the occurrence of heterotrophic bacteria and invertebrates in soil. Journal of Environmental Management 67, 255-266.
  • Blagodatskaya, E., Kuzyakov, Y., 2013. Active microorganisms in soil: Critical review of estimation criteria and approaches. Soil Biology & Biochemistry 67, 192-211.
  • Bloem, J., Hopkins, D.W., Benedetti, A., 2009. Microbiological Methods for Assessing Soil Quality. CABI Publishing, Wallingford.
  • Blouin, M., Hodson, M.E., Delgado, E.A., Baker, G., Brussaard, L., Butt, K.R., Dai, J., Dendooven, L., Peres, G., Tondoh, J.E., Cluzeau, D., Brun, J.J., 2013. A review of earthworm impact on soil function and ecosystem services. European Journal of Soil Science 64, 161-182.
  • Blum, W.E.H., 2005. Functions of Soil for Society and the Environment. Reviews in Environmental Science and Bio/Technology 4, 75-79.
  • Blume, H.-P., Leinweber, P., 2004. Plaggen Soils: landscape history, properties, and classification. Journal of Plant Nutrition and Soil Science 167, 319-327.
  • Boizard, H., Batey, T., McKenzie, D., Richard, G., Roger-Estrade, J., Ball, B., Bradley, I., Cattle, S., Hasinger, G., Munkholm, L.J., Murphy, B., Nievergelt, J., Peigne, J., Shepherd, G., 2005. Field meeting "Visual soil structure assessment" held at INRA Research Station, Estrée-Mons, France, 25-27 May 2005. Report available at http://iworx5.webxtra.net/~istroorg/download/WG%20Visual%20Soil%20Structure%20Assessment_Field%20meeting.pdf.
  • Bondi, G., Wall, D., Bacher, M., Emmet-Booth, J., Graça, J., Marongiu, I., Creamer, R., 2017. Role of soil biology and soil functions in relation to land use intensity. In EGU General Assembly Conference Abstracts (Vol. 19, p. 15021).
  • Bone, J., Barraclough, D., Eggleton, P., Head, M., Jones, D.T., Voulvoulis, N., 2014. Prioritising soil quality assessment through the screening of sites: the use of publicly collected data. Land Degradation & Development 25, 251-266.
  • Bone, J., Head, M., Barraclough, D., Archer, M., Scheib, C., Flight, D., Voulvoulis, N., 2010. Soil quality assessment under emerging regulatory requirements. Environment International 36, 609-622.
  • Bouchez, T., Blieux, A.L., Dequiedt, S., Domaizon, I., Dufresne, A., Ferreira, S., Godon, J.J., Hellal, J., Joulian, C., Quaiser, A., Martin-Laurent, F., Mauffret, A., Monier, J.M., Peyret, P., Schmitt-Koplin, P., Sibourg, O., D’oiron, E., Bispo, A., Deportes, I., Grand, C., Cuny, P., Maron, P.A., Ranjard, L., 2016. Molecular microbiology methods for environmental diagnosis. Environmental Chemistry Letters 14, 423-441.
  • Bouma, J., 2014. Soil science contributions towards Sustainable Development Goals and their implementation: linking soil functions with ecosystem services. Journal of Plant Nutrition and Soil Science 177, 111-120.
  • Bouma, J., Van Ittersum, M.K., Stoorvogel, J.J., Batjes, N.H., Droogers, P., Pulleman, M.M., 2017. Soil Capability: Exploring the Functional Potentials of Soils. In: Field, D.J.e.a. (Ed.) Global Soil Security. Springer International Publishing, Switzerland, pp. 27-44.
  • Brussaard, L., 2012. Ecosystem services provided by the soil biota. In: Wall, D.H., Bardgett, R.D., Behan-Pelletier, V., Herrick, J.E., Jones, H., Ritz, K., Six, J., Strong, D.R., van der Putten, W.H. (Eds.), Soil Ecology and Ecosystem Services. Oxford University Press, Oxford, UK, pp. 45-58.
  • Brussaard, L., Kuyper, T.W., Didden, W.A.M., de Goede, R.G.M., Bloem, J., 2004. Biological soil quality from biomass to biodiversity - importance and resilience to management stress and disturbance. In: Schjoenning, P., Elmholt, S., Christensen, B.T. (Eds.), Managing soil quality: challenges in modern agriculture. CABI, Wallingford, UK, pp. 139-171.
  • Brussaard, L., Pulleman, M.M., Ouédraogo, É., Mando, A., Six, J., 2007. Soil fauna and soil function in the fabric of the food web. Pedobiologia 50, 447-462.
  • Callahan, B., Proctor, D., Relman, D., Fukuyama, J., Holmes, S., 2016. REPRODUCIBLE RESEARCH WORKFLOW IN R FOR THE ANALYSIS OF PERSONALIZED HUMAN MICROBIOME DATA. Pac Symp Biocomput 21, 183-194.
  • Cambardella, C.A., Elliott, E.T., 1992. Particulate soil organic matter changes across a grassland cultivation sequence. Soil Science Society of America Journal 56, 777-783.
  • Candinas, T., Neyroud, J.-A., Oberholzer, H., Weisskopf, P., 2002. Grundlagen für die Beurteilung der nachhaltigen landwirtschaftlichen Bodennutzung. Bodenschutz 3, 90-98.
  • Cardoso, E.J.B.N., Vasconcellos, R.L.F., Bini, D., Miyauchi, M.Y.H., dos Santos, C.A., Alves, P.R.L., de Paula, A.M., Nakatani, A.S., Pereira, J.M., Nogueira, M.A., 2013. Soil health: Looking for suitable indicators. What should be considered to assess the effects of use and management on soil health? Scientia Agricola 70, 274-289.
  • Carter, M.R., Gregorich, E.G., Anderson, D.W., Doran, J.W., Janzen, H.H., Pierce, F.J., 1997. Concepts of soil quality and their significance. In: Gregorich, E.G., Carter, M.R. (Eds.), Developments in Soil Science. Elsevier, pp. 1-19.
  • Cecillon, L., Barthes, B.G., Gomez, C., Ertlen, D., Genot, V., Hedde, M., Stevens, A., Brun, J.J., 2009. Assessment and monitoring of soil quality using near-infrared reflectance spectroscopy (NIRS). European Journal of Soil Science 60, 770-784.
  • Chauhan, A., Mittu, B., 2015. Soil Health - An Issue of Concern for Environment and Agriculture. Journal of Bioremediation & Biodegradation 6, 286.
  • Chen, M., Duan, Z., Lin, X., 2011. Status quo and prospects of the study on soil quality standards in China (in Chinese with English abstract). Acta Pedologica Sinica 48(5), 1059-1071.
  • Chen, S., 1996. The quantitative evaluation of cultivated soils' quality in islands of Fuzhou. Journal of Fujian Teachers University (Natural Sciences) 12, 84-88.
  • Chen, Z.S., 1999. Selecting indicators to evaluate soil quality. Extension Bulletin 473. Food and Fertilizer Technology Center (FFTC), Taipei, Taiwan.
  • Clearwater, R.L., Martin, T., Hoppe, T., 2016. Environmental sustainability of Canadian agriculture: Agri-environmental indicator report series – Report #4. Ottawa, ON: Agriculture and Agri-Food Canada.
  • Clemente, J.S., Gregorich, E.G., Simpson, A.J., Kumar, R., Courtier-Murias, D., Simpson, M.J., 2012. Comparison of nuclear magnetic resonance methods for the analysis of organic matter composition from soil density and particle fractions. Environmental Chemistry 9, 97.
  • Congreves, K.A., Hayes, A., Verhallen, E.A., Van Eerd, L.L., 2015. Long-term impact of tillage and crop rotation on soil health at four temperate agroecosystems. Soil and Tillage Research 152, 17-28.
  • Costanza, R., dArge, R., deGroot, R., Farber, S., Grasso, M., Hannon, B., Limburg, K., Naeem, S., Oneill, R.V., Paruelo, J., Raskin, R.G., Sutton, P., vandenBelt, M., 1997. The value of the world's ecosystem services and natural capital. Nature 387, 253-260.
  • Cotching, W.E., Kidd, D.B., 2010. Soil quality evaluation and the interaction with land use and soil order in Tasmania, Australia. Agriculture Ecosystems & Environment 137, 358-366.
  • Coyle, C., Creamer, R.E., Schulte, R.P.O., O'Sullivan, L., Jordan, P., 2016. A Functional Land Management conceptual framework under soil drainage and land use scenarios. Environmental Science & Policy 56, 39-48.
  • Creamer, R.E., Hannula, S.E., Van Leeuwen, J.P., Stone, D., Rutgers, M., Schmelz, R.M., de Ruiter, P.C., Hendriksen, N.B., Bolger, T., Bouffaud, M.L., Buee, M., Carvalho, F., Costa, D., Dirilgen, T., Francisco, R., Griffiths, B.S., Griffiths, R., Martin, F., da Silva, P.M., Mendes, S., Morais, P.V., Pereira, C., Philippot, L., Plassart, P., Redecker, D., Rombke, J., Sousa, J.P., Wouterse, M., Lemanceau, P., 2016. Ecological network analysis reveals the inter-connection between soil biodiversity and ecosystem function as affected by land use across Europe. Applied Soil Ecology 97, 112-124.
  • Culman, S.W., Young-Mathews, A., Hollander, A.D., Ferris, H., Sánchez-Moreno, S., O’Geen, A.T., Jackson, L.E., 2010. Biodiversity is associated with indicators of soil ecosystem functions over a landscape gradient of agricultural intensification. Landscape Ecology 25, 1333-1348.
  • Davidson, D.A., 2000. Soil quality assessment: recent advances and controversies. Progress in Environmental Science 2, 342-350.
  • Davies, J., 2017. The business case for soil. Nature 543, 309-311.
  • de Groot, G.A., Geisen, S., Laros, I., Faber, J.H., Schmeltz, R., 2014. A tiered approach for high-resolution characterization of the soil faunal community via DNA metabarcoding. Book of Abstracts of the First Global Soil Biodiversity Conference. , pp. 87-87.
  • de Paul Obade, V., Lal, R., 2016. Towards a standard technique for soil quality assessment. Geoderma 265, 96-102.
  • Derenne, S., Quénéa, K., 2015. Analytical pyrolysis as a tool to probe soil organic matter. Journal of Analytical and Applied Pyrolysis 111, 108-120.
  • D’Hose, T., Cougnon, M., De Vliegher, A., Vandecasteele, B., Viaene, N., Cornelis, W., Van Bockstaele, E., Reheul, D., 2014. The positive relationship between soil quality and crop production: A case study on the effect of farm compost application. Applied Soil Ecology 75, 189-198.
  • Doran, J.W., Parkin, T.B., 1994. Defining and Assessing Soil Quality. In: Doran, J.W., Coleman, D.C., Bezdicek, D.F., Stewart, B.A. (Eds.), Defining Soil Quality for a Sustainable Environment. SSSA, Madison, WI, pp. 3-21.
  • Doran, J.W., Parkin, T.B., 1996. Quantitative Indicators of Soil Quality: A Minimum Data Set. In: Doran, J.W., Jones, A.J. (Eds.), Methods for Assessing Soil Quality. Soil Science Society of America, pp. 25-37.
  • Doran, J.W., Safley, M., 1997. Defining and assessing soil health and sustainable productivity. In: Pankhurst, C., Doube, B., Gupta, V.V.S.R. (Eds.), Biological Indicators of Soil Health. CAB International, pp. 1-28.
  • Döring, T.F., Vieweger, A., Pautasso, M., Vaarst, M., Finckh, M.R., Wolfe, M.S., 2015. Resilience as a universal criterion of health. Journal of the Science of Food and Agriculture 95, 455-465.
  • Dumanski, J., Pieri, C., 2000. Land quality indicators: research plan. Agriculture Ecosystems & Environment 81, 93-102.
  • Emmet-Booth, J.P., Forristal, P.D., Fenton, O., Ball, B.C., Holden, N.M., 2016. A review of visual soil evaluation techniques for soil structure. Soil Use and Management, n/a-n/a.
  • Eswaran, H., Almaraz, R., Reich, P., Zdruli, P., 1997. Soil quality and soil productivity in Africa. Journal of Sustainable Agriculture 10, 75-94.
  • European Commission, 2002. Towards a thematic strategy for soil protection. European Commission, Brussels. Available at http://eur-lex.europa.eu/legal-content/EN/TXT/?uri=CELEX:52002DC0179.
  • European Environment Agency, 1998. Europe's Environemnt: the Second Assessment an overview. Office for Official Publications of the European Communities. pp 43, Luxembourg.
  • FAO, 1976. A framework for land evaluation. FAO Soils bulletin 32. FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS, Rome.
  • Filep, T., Draskovits, E., Szabo, J., Koos, S., Laszlo, P., Szalai, Z., 2015. The dissolved organic matter as a potential soil quality indicator in arable soils of Hungary. Environmental Monitoring and Assessment 187.
  • Filip, Z., 2002. International approach to assessing soil quality by ecologically-related biological parameters. Agriculture Ecosystems & Environment 88, 169-174.
  • Foissner, W., 1999. Soil protozoa as bioindicators: pros and cons, methods, diversity, representative examples. Agriculture Ecosystems & Environment 74, 95-112.
  • Foresight, 2011. The Future of Food and farming - Final project report. pp 208, London, UK.
  • Gandariasbeitia, M., Besga, G., Albizu, I., Larregla, S., Mendarte, S., 2017. Prediction of chemical and biological variables of soil in grazing areas with visible- and near-infrared spectroscopy. Geoderma 305, 228-235.
  • Ge, Y., Thomasson, J.A., Sui, R., 2011. Remote sensing of soil properties in precision agriculture: A review. Frontiers of Earth Science 5, 229-238.
  • Ghaemi, M., Astaraei, A.R., Emami, H., Mahalati, M.N., Sanaeienejad, S.H., 2014. Determining soil indicators for soil sustainability assessment using principal component analysis of Astan Quds- east of Mashhad- Iran. Journal of Soil Science and Plant Nutrition 14, 987-1004.
  • Ghani, A., Dexter, M., Perrott, K.W., 2003. Hot-water extractable carbon in soils: a sensitive measurement for determining impacts of fertilisation, grazing and cultivation. Soil Biology & Biochemistry 35, 1231-1243.
  • Gil-Sotres, F., Trasar-Cepeda, C., Leiros, M.C., Seoane, S., 2005. Different approaches to evaluating soil quality using biochemical properties. Soil Biology & Biochemistry 37, 877-887.
  • Giller, K.E., C. Leeuwis, J. A. Andersson, W. Andriesse, A. Brouwer, P. Frost, P. Hebinck, I. Heitkönig, M. K. van Ittersum, N. Koning, R. Ruben, M. Slingerland, H. Udo, T. Veldkamp, C. van de Vijver, M. T. van Wijk, Windmeijer, P., 2008. Competing Claims on Natural Resources: What Role for Science? Ecology & Society 13, 34 (30nline).
  • Glaser, B., Birk, J.J., 2012. State of the scientific knowledge on properties and genesis of Anthropogenic Dark Earths in Central Amazonia (terra preta de Índio). Geochimica et Cosmochimica Acta 82, 39-51.
  • Glenk, K., McVittie, A., Moran, D., 2012. Deliverable D3.1: Soil and Soil Organic Carbon within an Ecosystem Service Approach Linking Biophysical and Economic Data. Available at http://smartsoil.eu/smartsoil-toolbox/project-deliverables/.
  • Gonzalez-Quiñones, V., Murphy, D.V., Bowles, R.W., Mele, P.M., 2015. A National Soil Quality Monitoring Framework. GRDC Soil Biology Initiative II. Final Report. UWA000138. 258 pp.
  • Gregorich, E.G., Carter, M.R., Angers, D.A., Monreal, C.M., Ellert, B.H., 1994. Towards a minimum data set to assess soil organic matter quality in agricultural soils. Canadian Journal of Soil Science 74, 367-385.
  • Guimaraes, R.M.L., Ball, B.C., Tormena, C.A., 2011. Improvements in the visual evaluation of soil structure. Soil Use and Management 27, 395-403.
  • Harris, R.F., Karlen, D.L., Mulla, D.J., 1996. A Conceptual Framework for Assessment and Management of Soil Quality and Health In: Doran, J.W., Jones, A.J. (Eds.), Methods for assessing soil quality.  SSSA Special Publication 49. . Soil Science Society of America, pp. 61-82.
  • Harrison, R., Strahm, B., Yi, X., 2010. Soil education and public awareness. In: Verheye, W.H. (Ed.) Soils, plant growth and crop production. Vol III. Encyclopaedia of Life Support Systems (EOLSS). EOLSS publishers/UNESCO, UK, pp. 196-218.
  • Hartmann, M., Frey, B., Mayer, J., Mader, P., Widmer, F., 2015. Distinct soil microbial diversity under long-term organic and conventional farming. Isme j 9, 1177-1194.
  • Haygarth, P.M., Ritz, K., 2009. The future of soils and land use in the UK: Soil systems for the provision of land-based ecosystem services. Land Use Policy 26, S187-S197.
  • Haynes, R.J., 2005. Labile organic matter fractions as central components of the quality of agricultural soils: An overview. In: Sparks, D.L. (Ed.) Advances in Agronomy, Vol 85, pp. 221-268.
  • Helliwell, J.R., Sturrock, C.J., Grayling, K.M., Tracy, S.R., Flavel, R.J., Young, I.M., Whalley, W.R., Mooney, S.J., 2013. Applications of X-ray computed tomography for examining biophysical interactions and structural development in soil systems: a review. European Journal of Soil Science 64, 279-297.
  • Hermans, S.M., Buckley, H.L., Case, B.S., Curran-Cournane, F., Taylor, M., Lear, G., 2017. Bacteria as Emerging Indicators of Soil Condition. Applied and Environmental Microbiology 83.
  • Herrick, J.E., Beh, A., Barrios, E., Bouvier, I., Coetzee, M., Dent, D., Elias, E., Hengl, T., Karl, J.W., Liniger, H., Matuszak, J., Neff, J.C., Ndungu, L.W., Obersteiner, M., Shepherd, K.D., Urama, K.C., van den Bosch, R., Webb, N.P., 2016. The Land-Potential Knowledge System (LandPKS): mobile apps and collaboration for optimizing climate change investments. Ecosystem Health and Sustainability 2, n/a-n/a.
  • Hornby, D., 1983. SUPPRESSIVE SOILS. Annual Review of Phytopathology 21, 65-85.
  • Hu, Y., Hong, F., Wu, Z., 2001. GIS-based soil quality evaluation with fuzzy variable weight. Acta Pedologica Sinica 38, 266-274.
  • Huber, S., Syed, B., Freudenschuss, A., Ernstsen, V., Loveland, P., 2001. Proposal for a European soil monitoring and assessment framework. Technical report 61. European Environment Agency.
  • Huber, S., Prokop, G., Arrouays, D., Banko, G., Bispo, A., Jones, R.J.A., Kibblewhite, M.G., Lexer, W., Möller, A., Rickson, R.J., Shishkov, T., Stephens, M., Toth, G., Van den Akker, J.J.H., Varallyay, G., Verheijen, F.G.A., Jones, A.R., 2008. Environmental Assessment of Soil for Monitoring: Volume I Indicators & Criteria. EUR 23490 EN/1, Office for the Official Publications of the European Communities, Luxembourg. pp 339pp.
  • Hugerth, L.W., Andersson, A.F., 2017. Analysing Microbial Community Composition through Amplicon Sequencing: From Sampling to Hypothesis Testing. Front Microbiol 8, 1561.
  • Hurni, H., Giger, M., Liniger, H., Mekdaschi Studer, R., Messerli, P., Portner, B., Schwilch, G., Wolfgramm, B., Breu, T., 2015. Soils, agriculture and food security: the interplay between ecosystem functioning and human well-being. Current Opinion in Environmental Sustainability 15, 25-34.
  • Idowu, O.J., van Es, H.M., Abawi, G.S., Wolfe, D.W., Ball, J.I., Gugino, B.K., Moebius, B.N., Schindelbeck, R.R., Bilgili, A.V., 2008. Farmer-oriented assessment of soil quality using field, laboratory, and VNIR spectroscopy methods. Plant and Soil 307, 243-253.
  • Islam, K., Singh, B., McBratney, A., 2003. Simultaneous estimation of several soil properties by ultra-violet, visible, and near-infrared reflectance spectroscopy. Australian Journal of Soil Research 41, 1101-1114.
  • Jackson, L.E., Pulleman, M.M., Brussaard, L., Bawa, K.S., Brown, G.G., Cardoso, I.M., de Ruiter, P.C., García-Barrios, L., Hollander, A.D., Lavelle, P., Ouédraogo, E., Pascual, U., Setty, S., Smukler, S.M., Tscharntke, T., Van Noordwijk, M., 2012. Social-ecological and regional adaptation of agrobiodiversity management across a global set of research regions. Global Environmental Change 22, 623-639.
  • Janvier, C., Villeneuve, F., Alabouvette, C., Edel-Hermann, V., Mateille, T., Steinberg, C., 2007. Soil health through soil disease suppression: Which strategy from descriptors to indicators? Soil Biology & Biochemistry 39, 1-23.
  • Johannes, A., Matter, A., Schulin, R., Weisskopf, P., Baveye, P.C., Boivin, P., 2017. Optimal organic carbon values for soil structure quality of arable soils. Does clay content matter? Geoderma 302, 14-21.
  • Karimi, B., Maron, P.A., Chemidlin-Prevost Boure, N., Bernard, N., Gilbert, D., Ranjard, L., 2017. Microbial diversity and ecological networks as indicators of environmental quality. Environmental Chemistry Letters 15, 265-281.
  • Karlen, D.L., Stott, D.E., 1994. A framework for evaluating physical and chemical indicators of soil quality. In: Doran, J.W., Coleman, D.C., Bezdicek, D.F., Stewart, B.A. (Eds.), Defining Soil Quality for a Sustainable Environment. SSSA, Madison, WI, pp. 53-72.
  • Karlen, D.L., Andrews, S.S., Doran, J.W., 2001. Soil quality: Current concepts and applications. Advances in Agronomy, Vol 74 74, 1-40.
  • Karlen, D.L., Ditzler, C.A., Andrews, S.S., 2003. Soil quality: why and how? Geoderma 114, 145-156.
  • Karlen, D.L., Gardner, J.C., Rosek, M.J., 1998. A soil quality framework for evaluating the impact of CRP. Journal of Production Agriculture 11, 56-60.
  • Kibblewhite, M.G., Ritz, K., Swift, M.J., 2008a. Soil health in agricultural systems. Philosophical Transactions of the Royal Society B-Biological Sciences 363, 685-701.
  • Kibblewhite, M.G., Jones, R.J.A., Montanarella, L., Baritz, R., Huber, S., Arrouays, D., Micheli, E., Stephens, M., 2008b. Environmental Assessment of Soil for Monitoring Volume VI: Soil Monitoring System for Europe. In: EUR 23490 EN/6 Office for the Official Publications of the European Communities Luxembourg. pp 72. Kinoshita, R., Moebius-Clune, B.N., van Es, H.M., Hively, W.D., Bilgili, A.V., 2012. Strategies for Soil Quality Assessment Using Visible and Near-Infrared Reflectance Spectroscopy in a Western Kenya Chronosequence. Soil Science Society of America Journal 76, 1776-1788.
  • Kirchmann, H., Andersson, R., 2001. The Swedish system for quality assessment of agricultural soils. Environmental Monitoring and Assessment 72, 129-139.
  • Kosmas, C., Kairis, O., Karavitis, C., Ritsema, C., Salvati, L., Acikalin, S., Alcala, M., Alfama, P., Atlhopheng, J., Barrera, J., Belgacem, A., Sole-Benet, A., Brito, J., Chaker, M., Chanda, R., Coelho, C., Darkoh, M., Diamantis, I., Ermolaeva, O., Fassouli, V., Fei, W., Feng, J., Fernandez, F., Ferreira, A., Gokceoglu, C., Gonzalez, D., Gungor, H., Hessel, R., Juying, J., Khatteli, H., Khitrov, N., Kounalaki, A., Laouina, A., Lollino, P., Lopes, M., Magole, L., Medina, L., Mendoza, M., Morais, P., Mulale, K., Ocakoglu, F., Ouessar, M., Ovalle, C., Perez, C., Perkins, J., Pliakas, F., Polemio, M., Pozo, A., Prat, C., Qinke, Y., Ramos, A., Ramos, J., Riquelme, J., Romanenkov, V., Rui, L., Santaloia, F., Sebego, R., Sghaier, M., Silva, N., Sizemskaya, M., Soares, J., Sonmez, H., Taamallah, H., Tezcan, L., Torri, D., Ungaro, F., Valente, S., de Vente, J., Zagal, E., Zeiliguer, A., Zhonging, W., Ziogas, A., 2014. Evaluation and Selection of Indicators for Land Degradation and Desertification Monitoring: Methodological Approach. Environmental Management 54, 951-970.
  • Kumari, A., Sumer, S., Jalan, B., Nongbri, P.L., Laskar, M.A., 2017. Impact of Next-Generation Sequencing Technology in Plant–Microbe Interaction Study. In: Kalia, V.C., Kumar, P. (Eds.), Microbial Applications Vol.1: Bioremediation and Bioenergy. Springer International Publishing, Cham, pp. 269-294.
  • Kyselková, M., Almario, J., Kopecký, J., Ságová-Marečková, M., Haurat, J., Muller, D., Grundmann, G.L., Moënne-Loccoz, Y., 2014. Evaluation of rhizobacterial indicators of tobacco black root rot suppressiveness in farmers' fields. Environmental Microbiology Reports 6, 346-353.
  • Larson, W.E., Pierce, F.J., 1991. Conservation and enhancement of soil qualityEvaluation for sustainable land management in the developing world. IBSRAM Proceedings, No. 12 Vol. 2, Technical papers, Bangkok, Thailand, pp. 175-203.
  • Larson, W.E., Pierce, F.J., 1994. The dynamics of soil quality as a measure of sustainable management. In: Doran, J.W., Coleman, D.C., Bezdicek, D.F., Stewart, B.A. (Eds.), Defining Soil Quality for a Sustainable Environment. SSSA, Madison, WI, pp. 37-51.
  • Lavelle, P., Decaëns, T., Aubert, M., Barot, S., Blouin, M., Bureau, F., Margerie, P., Mora, P., Rossi, J.P., 2006. Soil invertebrates and ecosystem services. European Journal of Soil Biology 42, Supplement 1, S3-S15.
  • Lehman, R.M., Cambardella, C.A., Stott, D.E., Acosta-Martinez, V., Manter, D.K., Buyer, J.S., Maul, J.E., Smith, J.L., Collins, H.P., Halvorson, J.J., Kremer, R.J., Lundgren, J.G., Ducey, T.F., Jin, V.L., Karlen, D.L., 2015. Understanding and Enhancing Soil Biological Health: The Solution for Reversing Soil Degradation. Sustainability 7, 988-1027.
  • Letey, J., Sojka, R.E., Upchurch, D.R., Cassel, D.K., Olson, K.R., Payne, W.A., Petrie, S.E., Price, G.H., Reginato, R.J., Scott, H.D., Smethurst, P.J., Triplett, G.B., 2003. Deficiencies in the soil quality concept and its application. Journal of Soil and Water Conservation 58, 180-187.
  • Lilburne, L., Sparling, G., Schipper, L., 2004. Soil quality monitoring in New Zealand: development of an interpretative framework. Agriculture Ecosystems & Environment 104, 535-544.
  • Lilburne, L.R., Hewitt, A.E., Sparling, G.P., Selvarajah, N., 2002. Soil quality in New Zealand: Policy and the science response. Journal of Environmental Quality 31, 1768-1773.
  • Lima, A.C.R., Brussaard, L., Totola, M.R., Hoogmoed, W.B., de Goede, R.G.M., 2013. A functional evaluation of three indicator sets for assessing soil quality. Applied Soil Ecology 64, 194-200.
  • Liu, X., Zhang, S., Jiang, Q., Bai, Y., Shen, G., Li, S., Ding, W., 2016. Using community analysis to explore bacterial indicators for disease suppression of tobacco bacterial wilt. Scientific Reports 6, 36773.
  • Lou, W., 2002. Evaluation and prediction of soil quality based on artificial neural network in the Sanjiang Plain. Chinese Journal of Management Science 10, 79-83.
  • Loveland, P.J., Thompson, T.R.E., 2002. Identification and development of a set of national indicators for soil quality. R&D Project Record P5-053/PR/02. Environment Agency, UK.
  • Macdonald, K.B., Wang, F., Fraser, W.R., Lelyk, G.W., 1998. Broad-scale Assessment of Agricultural Soil Quality in Canada Using Existing Land Resource Databases and GIS. Research Branch Technical Bulletin 1998-3E.
  • Mäder, P., Fliessbach, A., Dubois, D., Gunst, L., Fried, P., Niggli, U., 2002. Soil fertility and biodiversity in organic farming. Science 296, 1694-1697.
  • Martin, S., Baize, D., Bonneau, M., Chaussod, R., Gaultier, J.P., Lavelle, P., Legros, J.P., Lepretre, A., Sterckeman, T., 1998. The French national "Soil Quality Observatory". In: Congrès Mondial de la Science du Sol : Actes = World Congress of Soil Science : Proceedings., Montpellier (FRA), 1998/08/20-26., 1998.
  • Mausel, P.W., 1971. SOIL QUALITY IN ILLINOIS—AN EXAMPLE OF A SOILS GEOGRAPHY RESOURCE ANALYSIS*. The Professional Geographer 23, 127-136.
  • Mauser, W., Klepper, G., Rice, M., Schmalzbauer, B.S., Hackmann, H., Leemans, R., Moore, H., 2013. Transdisciplinary global change research: the co-creation of knowledge for sustainability. Current Opinion in Environmental Sustainability 5, 420-431.
  • McGarry, D., 2006. A methodology of a visual soil - field assessment tool. FAO.
  • McKenzie, D.C., 2001. Rapid assessment of soil compaction damage - I. The SOILpak score, a semi-quantitative measure of soil structural form. Australian Journal of Soil Research 39, 117-125.
  • McKenzie, M.C., Moncada, M.A.P., Ball, B.C., 2015. Reductions of yield gaps and improvement of ecological function through local-to-global applications of visual soil assessment. In: Ball, B.C., Munkholm, L.J. (Eds.), Visual soil evaluation: realizing potential crop production with minimum environmental impact. CABI, Wallingford, UK, pp. 31-48.
  • McKenzie, N., Bramley, R., Farmer, T., Janik, L., Murray, W., Smith, C., McLaughlin, M., 2003. Rapid soil measurement – a review of potential benefits and opportunities for the Australian grains industry. Report for the Grains Research and Development Corporation. pp 1-41.
  • Merrington, G., 2006. The development and use of soil quality indicators for assessing the role of soil in environmental interactions. The Environment Agency. Science Report SC030265.
  • Moebius-Clune, B.N., Moebius-Clune, D.J., Gugino, B.K., Idowu, O.J., Schindelbeck, R.R., Ristow, A.J., Van Es, H.M., Thies, J.E., Shayler, H.A., McBride, M.B., Wolfe, D.W., Abawi, G.S., 2016. Comprehensive assessment of soil health. The Cornell framework manual, Edition 3.0. Cornell University, Geneva, NY.
  • Montanarella, L., 2002. The EU Thematic Strategy on Soil Protection, pp. 275-288.
  • Montgomery, D.R., 2017. Growing a Revolution - Bringing our Soil back to Life. W.W. Norton & Company, New York, London.
  • Morvan, X., Saby, N.P.A., Arrouays, D., Le Bas, C., Jones, R.J.A., Verheijen, F.G.A., Bellamy, P.H., Stephens, M., Kibblewhite, M.G., 2008. Soil monitoring in Europe: A review of existing systems and requirements for harmonisation. Science of the Total Environment 391, 1-12.
  • Mouazen, A.M., Steffens, M., Borisover, M., 2016. Reflectance and fluorescence spectroscopy in soil science—Current and future research and developments. Soil and Tillage Research 155, 448-449.
  • Mueller, L., Shepherd, G., Schindler, U., Ball, B.C., Munkholm, L.J., Hennings, V., Smolentseva, E., Rukhovic, O., Lukin, S., Hu, C.S., 2013. Evaluation of soil structure in the framework of an overall soil quality rating. Soil & Tillage Research 127, 74-84.
  • Mueller, L., Schindler, U., Shepherd, T.G., Ball, B.C., Smolentseva, E., Pachikin, K., Hu, C., Hennings, V., Sheudshen, A.K., Behrendt, A., Eulenstein, F., Dannowski, R., 2014. The Muencheberg Soil Quality Rating for Assessing the Quality of Global Farmland. In: al., M.L.e. (Ed.) Novel Measurement and Assessment Tools for Monitoring and Management of Land and Water Resources in Agricultural Landscapes of Central Asia. Environmental Science and Engineering. Springer International Publishing, Switzerland.
  • Mulder, C., Schouten, A.J., Hund-Rinke, K., Breure, A.M., 2005. The use of nematodes in ecological soil classification and assessment concepts. Ecotoxicology and Environmental Safety 62, 278-289.
  • Neher, D.A., 2001. Role of nematodes in soil health and their use as indicators. Journal of Nematology 33, 161-168.
  • Nielsen, M.N., Winding, A., 2002. Microorganisms as indicators of soil health. NERI Technical Report No. 388. National Environmental Research Institute, Denmark.
  • Nortcliff, S., 2002. Standardisation of soil quality attributes. Agriculture Ecosystems & Environment 88, 161-168.
  • Norton, L., Greene, S., Scholefield, P., Dunbar, M., 2016. The importance of scale in the development of ecosystem service indicators? Ecological Indicators 61, 130-140.
  • O'Sullivan, L., Bampa, F., Knights, K., Creamer, R.E., 2017. Soil protection for a sustainable future: options for a soil monitoring network for Ireland. Soil Use and Management 33, 346-363.
  • Oberholzer, H.-R., Knuchel, R.F., Weisskopf, P., Gaillard, G., 2012. A novel method for soil quality in life cycle assessment using several soil indicators. Agronomy for Sustainable Development 32, 639-649.
  • Ockleford, C., Adriaanse, P., Berny, P., Brock, T., Duquesne, S., Grilli, S., Hernandez-Jerez, A., Bennekou, S., Klein, M., Kuhl, T., Laskowski, R., Machera, K., Pelkonen, O., Pieper, S., Stemmer, M., Sundh, I., Teodorovic, I., Tiktak, A., Topping, C., Wolterink, G., Craig, P., de Jong, F., Manachini, B., Sousa, P., Swarowsky, K., Auteri, D., Arena, M., Rob, S., 2017. Scientific Opinion addressing the state of the science on risk assessment of plant protection products for in-soil organisms. EFSA Journal 2017 15, 1-225.
  • Orgiazzi, A., Dunbar, M.B., Panagos, P., de Groot, G.A., Lemanceau, P., 2015. Soil biodiversity and DNA barcodes: opportunities and challenges. Soil Biology & Biochemistry 80, 244-250.
  • Pankhurst, C.E., Doube, B.M., Gupta, V.V.S.R., 1997. Biological indicators of soil health: synthesis. In: Pankhurst, C.E., Doube, B.M., Gupta, V.V.S.R. (Eds.), Biological Indicators of Soil Health. CAB International, Wallingford, Oxon, pp. 419-435.
  • Parisi, V., Menta, C., Gardi, C., Jacomini, C., Mozzanica, E., 2005. Microarthropod communities as a tool to assess soil quality and biodiversity: a new approach in Italy. Agriculture Ecosystems & Environment 105, 323-333.
  • Parr, J.F., Papendick, R.I., Hornick, S.B., Meyer, R.E., 1992. Soil quality: Attributes and relationship to alternative and sustainable agriculture. American Journal of Alternative Agriculture 7, 5-11.
  • Patzel, N., Sticher, H., Karlen, D.L., 2000. Soil fertility - Phenomenon and concept. Journal of Plant Nutrition and Soil Science-Zeitschrift Fur Pflanzenernahrung Und Bodenkunde 163, 129-142.
  • Paz-Kagan, T., Shachak, M., Zaady, E., Karnieli, A., 2014. A spectral soil quality index (SSQI) for characterizing soil function in areas of changed land use. Geoderma 230-231, 171-184.
  • Peerlkamp, P.K., 1959. A visual method of soil structure evaluation. Meded. v.d. Landbouwhogeschool en Opzoekingsstations van de Staat te Gent. XXIV No. 24, pp. 216–221.
  • Pielke, R., 2007. The honest broker - making sense of science in policy and politics. Cambridge University Press, Cambridge, UK.
  • Pulido Moncada, M., Gabriels, D., Cornelis, W.M., 2014. Data-driven analysis of soil quality indicators using limited data. Geoderma 235-236, 271-278.
  • Pulleman, M., Creamer, R., Hamer, U., Helder, J., Pelosi, C., Peres, G., Rutgers, M., 2012. Soil biodiversity, biological indicators and soil ecosystem services-an overview of European approaches. Current Opinion in Environmental Sustainability 4, 529-538.
  • Reidy, B., Simo, I., Sills, P., Creamer, R.E., 2016. Pedotransfer functions for Irish soils – estimation of bulk density (ρb) per horizon type. SOIL 2, 25-39.
  • Rhodes, C.J., 2017. The imperative for regenerative agriculture. Science Progress 100, 80-129.
  • Riches, D., Porter, I.J., Oliver, D.P., Bramley, R.G.V., Rawnsley, B., Edwards, J., White, R.E., 2013. Review: soil biological properties as indicators of soil quality in Australian viticulture. Australian Journal of Grape and Wine Research 19, 311-323.
  • Ritz, K., Black, H.I.J., Campbell, C.D., Harris, J.A., Wood, C., 2009. Selecting biological indicators for monitoring soils: A framework for balancing scientific and technical opinion to assist policy development. Ecological Indicators 9, 1212-1221.
  • Robinson, D.A., Panagos, P., Borrelli, P., Jones, A., Montanarella, L., Tye, A., Obst, C.G., 2017. Soil natural capital in Europe: a framework for state and change assessment. Scientific Reports 7.
  • Rocca, J.D., Hall, E.K., Lennon, J.T., Evans, S.E., Waldrop, M.P., Cotner, J.B., Nemergut, D.R., Graham, E.B., Wallenstein, M.D., 2015. Relationships between protein-encoding gene abundance and corresponding process are commonly assumed yet rarely observed. Isme Journal 9, 1693-1699.
  • Rockström, J., Schellnhuber, H.J., Hoskins, B., Ramanathan, V., Schlosser, P., Brasseur, G.P., Gaffney, O., Nobre, C., Meinshausen, M., Rogelj, J., Lucht, W., 2016. The world's biggest gamble. Earth's Future 4, 465-470.
  • Roger-Estrade, J., Richard, G., Caneill, J., Boizard, H., Coquet, Y., Defossez, P., Manichon, H., 2004. Morphological characterisation of soil structure in tilled fields: from a diagnosis method to the modelling of structural changes over time. Soil & Tillage Research 79, 33-49.
  • Römbke, J., Gardi, C., Creamer, R., Miko, L., 2016. Soil biodiversity data: Actual and potential use in European and national legislation. Applied Soil Ecology 97, 125-133.
  • Romig, D.E., Garlynd, M.J., Harris, R.F., 1996. Farmer-Based Assessment of Soil Quality: A Soil Health Scorecard. In: Doran, J.W., Jones, A.J. (Eds.), Methods for Assessing Soil Quality. Soil Science Society of America, pp. 39-60.
  • Rossiter, D.G., 1996. A theoretical framework for land evaluation. Geoderma 72, 165-190.
  • Rüdisser, J., Tasser, E., Peham, T., Meyer, E., Tappeiner, U., 2015. The dark side of biodiversity: Spatial application of the biological soil quality indicator (BSQ). Ecological Indicators 53, 240-246.
  • Ruf, A., Beck, L., Dreher, P., Hund-Rinke, K., Rombke, J., Spelda, J., 2003. A biological classification concept for the assessment of soil quality: "biological soil classification scheme" (BBSK). Agriculture Ecosystems & Environment 98, 263-271.
  • Rutgers, M., Jensen, J., 2011. Site-Specific Ecological Risk Assessment, 693-720 pp.
  • Rutgers, M., Mulder, C., Schouten, A.J., 2008. Soil ecosystem profiling in the Netherlands with ten references for soil biological quality. RIVM Report 607604009/2008. National Institute for Public Health and the Environment (RIVM).
  • Rutgers, M., van Wijnen, H.J., Schouten, A.J., Mulder, C., Kuiten, A.M.P., Brussaard, L., Breure, A.M., 2012. A method to assess ecosystem services developed from soil attributes with stakeholders and data of four arable farms. Science of the Total Environment 415, 39-48.
  • Rutgers, M., Schouten, A.J., Bloem, J., van Eekeren, N., de Goede, R.G.M., Akkerhuis, G.A.J.M.J.O., van der Wal, A., Mulder, C., Brussaard, L., Breure, A.M., 2009. Biological measurements in a nationwide soil monitoring network. European Journal of Soil Science 60, 820-832.
  • Saleh-Lakha, S., Miller, M., Campbell, R.G., Schneider, K., Elahimanesh, P., Hart, M.M., Trevors, J.T., 2005. Microbial gene expression in soil: methods, applications and challenges. Journal of Microbiological Methods 63, 1-19.
  • Salomé, C., Coll, P., Lardo, E., Metay, A., Villenave, C., Marsden, C., Blanchart, E., Hinsinger, P., Le Cadre, E., 2016. The soil quality concept as a framework to assess management practices in vulnerable agroecosystems: A case study in Mediterranean vineyards. Ecological Indicators 61, 456-465.
  • Saxton, K.E., Rawls, W.J., 2006. Soil water characteristic estimates by texture and organic matter for hydrologic solutions. Soil Science Society of America Journal 70, 1569-1578.
  • Schipper, L.A., Sparling, G.P., 2000. Performance of soil condition indicators across taxonomic groups and land uses. Soil Science Society of America Journal 64, 300-311.
  • Schlatter, D., Kinkel, L.L., Thomashow, L.S., Weller, D.M., Paulitz, T.C., 2017. Disease Suppressive Soils: New Insights from the Soil Microbiome. Phytopathology.
  • Schleyer, C., Lux, A., Mehring, M., Görg, C., 2017. Ecosystem Services as a Boundary Concept: Arguments from Social Ecology. Sustainability 9, 1107.
  • Schloter, M., Dilly, O., Munch, J.C., 2003. Indicators for evaluating soil quality. Agriculture Ecosystems & Environment 98, 255-262.
  • Schloter, M., Nannipieri, P., Sørensen, S.J., van Elsas, J.D., 2017. Microbial indicators for soil quality. Biology and Fertility of Soils.
  • Schoenholtz, S.H., Van Miegroet, H., Burger, J.A., 2000. A review of chemical and physical properties as indicators of forest soil quality: challenges and opportunities. Forest Ecology and Management 138, 335-356.
  • Schoumans, O.F., Chardon, W.J., Bechmann, M.E., Gascuel-Odoux, C., Hofman, G., Kronvang, B., Rubæk, G.H., Ulén, B., Dorioz, J.M., 2014. Mitigation options to reduce phosphorus losses from the agricultural sector and improve surface water quality: A review. Science of the Total Environment 468, 1255-1266.
  • Schulte, R.P.O., Creamer, R.E., Donnellan, T., Farrelly, N., Fealy, R., O'Donoghue, C., O'HUallachain, D., 2014. Functional land management: A framework for managing soil-based ecosystem services for the sustainable intensification of agriculture. Environmental Science & Policy 38, 45-58.
  • Schulte, R.P.O., Bampa, F., Bardy, M., Coyle, C., Creamer, R.E., Fealy, R., Gardi, C., Ghaley, B.B., Jordan, P., Laudon, H., O'Donoghue, C., Ó'hUallacháin, D., O'Sullivan, L., Rutgers, M., Six, J., Toth, G.L., Vrebos, D., 2015. Making the Most of Our Land: Managing Soil Functions from Local to Continental Scale. Frontiers in Environmental Science 3.
  • Schwilch, G., Hessel, R., Verzandvoort, S., 2012. Desire for greener land. Options for sustainable land management in drylands. Bern: University of Bern—CDE, Alterra—Wageningen UR, ISRIC—World Soil Information and CTA—Technical Centre for Agriculture and Rural Cooperation.
  • Schwilch, G., Bernet, L., Fleskens, L., Giannakis, E., Leventon, J., Marañón, T., Mills, J., Short, C., Stolte, J., van Delden, H., Verzandvoort, S., 2016. Operationalizing ecosystem services for the mitigation of soil threats: A proposed framework. Ecological Indicators 67, 586-597.
  • Seufert, V., Ramankutty, N., 2017. Many shades of gray-The context-dependent performance of organic agriculture. Science Advances 3, 14.
  • Seybold, C.A., Herrick, J.E., Brejda, J.J., 1999. Soil resilience: A fundamental component of soil quality. Soil Science 164, 224-234.
  • Shepherd, G., Stagnari, F., Pisante, M., Benites, J., 2008. VISUAL SOIL ASSESSMENT (VSA) Field Guides. 1. Annual crops. FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS (FAO), Rome, Italy.
  • Shukla, M.K., Lal, R., Ebinger, M., 2006. Determining soil quality indicators by factor analysis. Soil & Tillage Research 87, 194-204.
  • Simon, C., Daniel, R., 2011. Metagenomic Analyses: Past and Future Trends. Applied and Environmental Microbiology 77, 1153-1161.
  • Sims, J.T., Cunningham, S.D., Sumner, M.E., 1997. Assessing soil quality for environmental purposes: Roles and challenges for soil scientists. Journal of Environmental Quality 26, 20-25.
  • Sojka, R.E., Upchurch, D.R., 1999. Reservations regarding the soil quality concept. Soil Science Society of America Journal 63, 1039-1054.
  • Sojka, R.E., Upchurch, D.R., Borlaug, N.E., 2003. Quality soil management or soil quality management: Performance versus semantics. In: Sparks, D.L. (Ed.) Advances in Agronomy, Vol 79, pp. 1-68.
  • Sonneveld, M.P.W., Hack-ten Broeke, M.J.D., van Diepen, C.A., Boogaard, H.L., 2010. Thirty years of systematic land evaluation in the Netherlands. Geoderma 156, 84-92.
  • Southorn, N., Cattle, S., 2000. Monitoring Soil Quality for Central Tablelands Grazing Systems. Communications in Soil Science and Plant Analysis 31, 2211-2229.
  • Sparling, G., Schipper, L., 2004. Soil quality monitoring in New Zealand: trends and issues arising from a broad-scale survey. Agriculture Ecosystems & Environment 104, 545-552.
  • Sparling, G.P., Schipper, L.A., 2002. Soil quality at a national scale in New Zealand. Journal of Environmental Quality 31, 1848-1857.
  • Sparling, G.P., Schipper, L.A., Bettjeman, W., Hill, R., 2004. Soil quality monitoring in New Zealand: practical lessons from a 6-year trial. Agriculture Ecosystems & Environment 104, 523-534.
  • Stavi, I., Bel, G., Zaady, E., 2016. Soil functions and ecosystem services in conventional, conservation, and integrated agricultural systems. A review. Agronomy for Sustainable Development 36, 32.
  • Stenberg, B., 1999. Monitoring soil quality of arable land: Microbiological indicators. Acta Agriculturae Scandinavica Section B-Soil and Plant Science 49, 1-24.
  • Stenberg, B., Pell, M., Torstensson, L., 1998. Integrated evaluation of variation in biological, chemical and physical soil properties. Ambio 27, 9-15.
  • Stenberg, B., Rossel, R.A.V., Mouazen, A.M., Wetterlind, J., 2010. VISIBLE AND NEAR INFRARED SPECTROSCOPY IN SOIL SCIENCE. In: Sparks, D.L. (Ed.) Advances in Agronomy, Vol 107, pp. 163-215.
  • Stolte, J., Mehreteab, T., Øygarden, L., Kværnø, S., Keizer, J., Verheijen, F., Panagos, P., Ballabio, C., Hessel, R., 2016. Soil threats in Europe; EUR 27607 EN; doi:10.2788/488054 (print); doi:10.2788/828742 (online).
  • Stone, D., Ritz, K., Griffiths, B.G., Orgiazzi, A., Creamer, R.E., 2016a. Selection of biological indicators appropriate for European soil monitoring. Applied Soil Ecology 97, 12-22.
  • Stone, D., Costa, D., Daniell, T.J., Mitchell, S.M., Topp, C.F.E., Griffiths, B.S., 2016b. Using nematode communities to test a European scale soil biological monitoring programme for policy development. Applied Soil Ecology 97, 78-85.
  • Struik, P.C., Kuyper, T.W., Brussaard, L., Leeuwis, C., 2014. Deconstructing and unpacking scientific controversies in intensification and sustainability: why the tensions in concepts and values? Current Opinion in Environmental Sustainability 8, 80-88.
  • Swanepoel, P.A., du Preez, C.C., Botha, P.R., Snyman, H.A., Habig, J., 2014. Soil quality characteristics of kikuyu–ryegrass pastures in South Africa. Geoderma 232-234, 589-599.
  • Teng, Y.G., Wu, J., Lu, S.J., Wang, Y.Y., Jiao, X.D., Song, L.T., 2014. Soil and soil environmental quality monitoring in China: A review. Environment International 69, 177-199.
  • Tesfahunegn, G.B., 2014. Soil Quality Assessment Strategies for Evaluating Soil Degradation in Northern Ethiopia. Applied and Environmental Soil Science 2014, 1-14.
  • Torsvik, V., Ovreas, L., 2002. Microbial diversity and function in soil: from genes to ecosystems. Current Opinion in Microbiology 5, 240-245.
  • Torstensson, L., Pell, M., Stenberg, B., 1998. Need of a strategy for evaluation of arable soil quality. Ambio 27, 4-8.
  • Toth, B., Weynants, M., Nemes, A., Mako, A., Bilas, G., Toth, G., 2015. New generation of hydraulic pedotransfer functions for Europe. European Journal of Soil Science 66, 226-238.
  • Tóth, G., Gardi, C., Bódis, K., Ivits, É., Aksoy, E., Jones, A., Jeffrey, S., Petursdottir, T., Montanarella, L., 2013. Continental-scale assessment of provisioning soil functions in Europe. 2 Ecological Processes 2013, 1-18.
  • Trasar-Cepeda, C., Leiros, M.C., Gil-Sotres, F., 2008. Hydrolytic enzyme activities in agricultural and forest soils. Some implications for their use as indicators of soil quality. Soil Biology & Biochemistry 40, 2146-2155.
  • Trivedi, P., Delgado-Baquerizo, M., Trivedi, C., Hamonts, K., Anderson, I.C., Singh, B.K., 2017. Keystone microbial taxa regulate the invasion of a fungal pathogen in agro-ecosystems. Soil Biology and Biochemistry 111, 10-14.
  • Troldborg, M., Aalders, I., Towers, W., Hallett, P.D., McKenzie, B.M., Bengough, A.G., Lilly, A., Ball, B.C., Hough, R.L., 2013. Application of Bayesian Belief Networks to quantify and map areas at risk to soil threats: Using soil compaction as an example. Soil and Tillage Research 132, 56-68.
  • Tscherning, K., Helming, K., Krippner, B., Sieber, S., Paloma, S.G.y., 2012. Does research applying the DPSIR framework support decision making? Land Use Policy 29, 102-110.
  • Vågen, T.-G., Winowiecki, L.A., Abegaz, A., Hadgu, K.M., 2013. Landsat-based approaches for mapping of land degradation prevalence and soil functional properties in Ethiopia. Remote Sensing of Environment 134, 266-275.
  • van Beek, C.L., Toth, T., Hagyo, A., Toth, G., Boix, L.R., Vidal, C.A., Malet, J.P., Maquaire, O., van den Akker, J.J.H., van der Zee, S., Verzandvoort, S., Simota, C., Kuikman, P.J., Oenema, O., 2010. The need for harmonizing methodologies for assessing soil threats in Europe. Soil Use and Management 26, 299-309.
  • van Diepen, C.E., Keulen, H.v., Wolf, J., Berkhout, J.A.A., 1991. Land evaluation: from intuition to quantification. Advances in Soil Science 15, 139-204.
  • van Eekeren, N., de Boer, H., Hanegraaf, M., Bokhorst, J., Nierop, D., Bloem, J., Schouten, T., de Goede, R., Brussaard, L., 2010. Ecosystem services in grassland associated with biotic and abiotic soil parameters. Soil Biology & Biochemistry 42, 1491-1504.
  • van Latesteijn, H.C., 1995. Assessment of future options for land use in the European Community. Ecological Engineering 4, 211-222.
  • van Leeuwen, J.P., Saby, N.P.A., Jones, A., Louwagie, G., Micheli, E., Rutgers, M., Schulte, R.P.O., Spiegel, H., Toth, G., Creamer, R.E., 2017. Gap assessment in current soil monitoring networks across Europe for measuring soil functions. Environmental Research Letters in press. https://doi.org/10.1088/1748-9326/aa9c5c.
  • Velasquez, E., Lavelle, P., Andrade, M., 2007. GISQ, a multifunctional indicator of soil quality. Soil Biology & Biochemistry 39, 3066-3080.
  • Vestergaard, G., Schulz, S., Schöler, A., Schloter, M., 2017. Making big data smart—how to use metagenomics to understand soil quality. Biology and Fertility of Soils 53, 479-484.
  • Veum, K.S., Sudduth, K.A., Kremer, R.J., Kitchen, N.R., 2017. Sensor data fusion for soil health assessment. Geoderma 305, 53-61.
  • Viscarra Rossel, R.A., Lobsey, C.R., Sharman, C., Flick, P., McLachlan, G., 2017. Novel Proximal Sensing for Monitoring Soil Organic C Stocks and Condition. Environmental Science & Technology 51, 5630-5641.
  • Visser, S., Parkinson, D., 1992. Soil biological criteria as indicators of soil quality: Soil microorganisms. American Journal of Alternative Agriculture 7, 33-37.
  • Volchko, Y., Norrman, J., Bergknut, M., Rosén, L., Söderqvist, T., 2013. Incorporating the soil function concept into sustainability appraisal of remediation alternatives. Journal of Environmental Management 129, 367-376.
  • Volchko, Y., Norrman, J., Rosèn, L., Norberg, T., 2014. A minimum data set for evaluating the ecological soil functions in remediation projects. Journal of Soils and Sediments 14, 1850-1860.
  • Walter, A., Finger, R., Huber, R., Buchmann, N., 2017. Opinion: Smart farming is key to developing sustainable agriculture. Proceedings of the National Academy of Sciences 114, 6148-6150.
  • Wan, C., Zhang, X., 1991. Application of fuzzy mathematics in the appraisal of soil quality. Journal of Applied Sciences 9, 359-365.
  • Wander, M.M., Walter, G.L., Nissen, T.M., Bollero, G.A., Andrews, S.S., Cavanaugh-Grant, D.A., 2002. Soil Quality. Agronomy Journal 94, 23-32.
  • Wang, C., Walker, B.D., Rees, H.W., 1997. Establishing a benchmark system for monitoring soil quality in Canada. In: Gregorich, E.G., Carter, M.R. (Eds.), Developments in Soil Science. Elsevier, pp. 323-337.
  • Wang, J., Yang, L., Shan, Y., 2001. Application of fuzzy mathematics to soil quality evaluation. Acta Pedologica Sinica 38, 176-183.
  • Wang, X.Q., Sharp, C.E., Jones, G.M., Grasby, S.E., Brady, A.L., Dunfield, P.F., 2015. Stable-Isotope Probing Identifies Uncultured Planctomycetes as Primary Degraders of a Complex Heteropolysaccharide in Soil. Applied and Environmental Microbiology 81, 4607-4615.
  • Warkentin, B.P., 1995. The changing concept of soil quality. Journal of Soil and Water Conservation 50, 226-228.
  • Warkentin, B.P., Fletcher, H.R., 1977. Soil quality for intensive agricultureProceedings of the International Seminar on Soil Environment and Fertility Management in Intensive Agriculture. Society of Science of Soil and Manure. Japan. , pp. 594-598.
  • Wattel-Koekkoek, E.J.W., van Vliet, M.E., Boumans, L.J.M., Ferreira, J., Spijker, J., van Leeuwen, T.C., 2012. Soil quality in the Netherlands for 2006-2010 and the change compared with 1993-1997: Results of the National Soil Quality Monitoring Network. RIVM Report 680718003.
  • Watzinger, A., 2015. Microbial phospholipid biomarkers and stable isotope methods help reveal soil functions. Soil Biology & Biochemistry 86, 98-107.
  • Weil, R.R., Islam, K.R., Stine, M.A., Gruver, J.B., Samson-Liebig, S.E., 2003. Estimating active carbon for soil quality assessment: A simplified method for laboratory and field use. American Journal of Alternative Agriculture 18, 3-17.
  • West, L.T., Tugel, A.J., Wills, S.A., Stiles, C.A., Hipple, K., 2010. Soil survey and inventory of dynamic soil properties in the U.S.A. In: 19th World Congress of Soil Science, Soil solutions for a changing world, 1-6 August 2010, Brisbane, Australia.
  • Wienhold, B.J., Andrews, S.S., Karlen, D.L., 2004. Soil quality: a review of the science and experiences in the USA. Environmental Geochemistry and Health 26, 89-95.
  • Wienhold, B.J., Karlen, D.L., Andrews, S.S., Stott, D.E., 2009. Protocol for indicator scoring in the soil management assessment framework (SMAF). Renewable Agriculture and Food Systems 24, 260-266.
  • Wu, T.H., Milner, H., Diaz-Perez, J.C., Ji, P.S., 2015. Effects of soil management practices on soil microbial communities and development of southern blight in vegetable production. Applied Soil Ecology 91, 58-67.
  • Xu, J.M., Zhang, G.L., Xie, Z.M., 2008. Soil quality index and assessment/consultative system. In: Cao, Z.H., Zhou, J.M. (Eds.), Soil quality of China. Science Press, Beijing, pp. 39-89.
  • Yao, R., Yang, J., Gao, P., Zhang, J., Jin, W., 2013. Determining minimum data set for soil quality assessment of typical salt-affected farmland in the coastal reclamation area. Soil & Tillage Research 128, 137-148.
  • Zhang, J., 1992. Evaluation method of soils from protective forest areas in the Chuanjiang basin, Sichuan province. Mountain Research 10, 109-155.

 

Go To Top